Both Tom Glenn and Jay Lopez are right on. The EBC's in ALL performance ranges, including the racing BLUES, are also very easy on your rotors. Unless a weird circumstance has happened, your rotors should not be significantly "scored" enough to require surfacing when switching back and forth. A simple scuffing as Tom described should be sufficient. And...... Tom should know...... having already won a Super Stock Viper Day's season championship on those YELLOWS. Thanks Tom.
If I remember correctly, Jay's car runs a complete Dilusi setup, with Wilwood calipers all around, and the EBC's work just the same on those and all the other aftermarket applications.