For starters they improved the cooling system and raised the compression ratio slightly, GenII has different engine castings with cross bolted main bearings; the motor was something like 80 lbs lighter. Changes to ECU.
Injectors, headers, exhaust system, cam, PCM, compression, heads and coil packs were the major changes. The Gen 1 rated hp (400) was lower than reality. The Gen 1 also had a a very restrictive exhaust system.
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