"-I would actually advise running the 01' PCM instead. The later PCM's are actually JTEC+ and have faster processing speeds. (96-98 are the slowest, 99-02 are in the middle, and 03-06 are the fastest of the JTEC controllers) I can always send you a screen shot of some parameters of a 96-99 PCM so you can copy them into the other year PCM to get the benefit of both."
Was the '01 PCM different than the '00 and '02?
If I get an '01 are there any compatibility issues with my '97 car?
No compatibility issues between any 96.5-02 PCM other than a bit of tune differences... which would be overwritten by SCT anyway. 01 and 02 are the same, but 99, 00 and 01-02 are slightly different tunes. They are the the same controller however.
The PCM's changed to a slightly faster version somwhere around 98-99, I havent logged a 98 yet to tell which version it is using- but I know that 96-97s are slower than 99-02.